Partonomy list P3F, primary language: LA, subsidiary: EN, interface: EN, work in progress

diencephalon

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Top level systema nervosum centrale Short Extended
Level 2 encephalon Short Extended
Current level diencephalon Short
Subsidiary language with Latin
Non Latin primary language
Partonomy list
FMA TA UID ISA
Short official Latin term
Short English equivalent
62001 5263 tax
diencephalon
diencephalon
7511 tax
external morphology of diencephalon
62010 5775 tax
prethalamus (par)
prethalamus (pair)
9028 tax
eminentia prethalamica (par)
prethalamic eminence (pair)
62080 5774 tax
stria medullaris prethalami ; stria medullaris thalami
stria medullaris of prethalamus; stria medullaris of thalamus
62007 5769 tax
thalamus (par)
thalamus (pair)
74867 5770 tax
tuberculum anterius thalami (par)
thalamic anterior tubercle (pair)
62178 5772 tax
pulvinar (par)
pulvinar (pair)
62023 5776 tax
metathalamus (par)
metathalamus (pair)
62209 5777 tax
corpus geniculatum laterale
lateral geniculate body
62211 5778 tax
corpus geniculatum mediale
medial geniculate body
62009 5765 tax
epithalamus
epithalamus
62032 5766 tax
habenula (par)
habenula (pair)
62048 5792 tax
commissura habenulae
habenular commissure
78466 5767 tax
sulcus habenulae (par) ; sulcus habenularis (par)
sulcus of habenula (pair)
74868 5768 tax
trigonum habenulare (par)
habenular trigone (pair)
62033 3543 tax
glandula pinealis ; corpus pineale
pineal gland ; pineal body
62402 9185 tax
pretectum
pretectum
62072 5794 tax
commissura posterior
posterior commissure
7512 tax
morphologia interna diencephali
internal morphology of diencephalon
83917 9033 tax
grey matter of prethalamus
62026 5849 tax
nucleus reticularis prethalami (par) ; nucleus reticularis thalami (par)
reticular nucleus of prethalamus (pair) ; reticular nucleus of thalamus (pair)
62215 5904 tax
nucleus ventralis corporis geniculati lateralis (par) ; nucleus pregeniculatus (par)
ventral lateral geniculate nucleus (pair); pregeniculate nucleus (pair)
5894 tax
nuclei campi perizonalis (par)
nuclei of perizonal field (pair)
62037 5895 tax
nucleus campi medialis (par)
nucleus of medial field (pair) ; H field (pair)
77526 5896 tax
nucleus campi dorsalis (par)
nucleus of dorsal field (pair) ; H1 field (pair)
77527 5897 tax
nucleus campi ventralis (par)
nucleus of ventral field (pair) ; H2 field (pair)
62038 5898 tax
zona incerta (par)
zona incerta (pair)
6304 tax
cellulae dopaminergicae zonae incertae (par) ; cellulae dopaminergicae A13 (par)
dopaminergic cells of zona incerta (pair) ; dopaminergic cells A13 (pair)
9104 tax
white matter of prethalamus
8637 tax
tractus commissurales epithalami
commissural tracts of epithalamus
62048 5792 tax
commissura habenulae
habenular commissure
8638 tax
tractus longi epithalami
long tracts of epithalamus
8639 tax
tractus efferentes epithalami
epithalamic efferent tracts
72400 5802 tax
tractus habenulointerpeduncularis ; fasciculus retroflexus
habenulointerpeduncular tract ; fasciculus retroflexus
83914 5813 tax
grey matter of thalamus (pair)
5814 tax
nuclei anteriores thalami (par) ; regio anterior thalami (par)
anterior nuclei of thalamus (pair) ; anterior region of thalamus (pair)
62141 5815 tax
nucleus anterodorsalis (par)
anterodorsal nucleus (pair)
62142 5816 tax
nucleus anteromedialis (par)
anteromedial nucleus (pair)
62143 5817 tax
nucleus anteroventralis (par)
anteroventral nucleus (pair)
62176 5819 tax
nucleus dorsalis lateralis (par)
dorsal superficial nucleus (pair); laterodorsal nucleus (pair); lateral dorsal nucleus (pair)
5832 tax
nuclei mediales thalami (par) ; regio medialis thalami (par)
medial nuclei of thalamus (pair) ; medial region of thalamus (pair)
62156 5833 tax
nucleus mediodorsalis (par)
mediodorsal nucleus (pair)
62162 5834 tax
pars parvocellularis (par) ; nucleus lateralis (par)
parvocellular nucleus (pair); lateral nucleus (pair)
62161 5835 tax
pars magnocellularis (par) ; nucleus medialis (par)
magnocellular nucleus (pair); medial nucleus (pair)
62160 5836 tax
pars paralaminaris (par)
paralaminar part (pair)
5826 tax
nuclei intralaminares thalami (par)
intralaminar nuclei of thalamus (pair)
8628 tax
nuclei intralaminares anteriores (par)
anterior intralaminar nuclei (pair)
62171 5828 tax
nucleus centralis medialis (par)
central medial nucleus (pair)
62172 5830 tax
nucleus paracentralis (par)
paracentral nucleus (pair)
62170 5827 tax
nucleus centralis lateralis (par)
central lateral nucleus (pair)
12224 tax
nucleus cucullaris (par)
cucullar nucleus (pair)
8629 tax
nuclei intralaminares centrales (par)
central intralaminar nuclei (pair)
62165 5829 tax
nucleus centromedianus (par)
centromedian nucleus (pair)
62166 5831 tax
nucleus parafascicularis (par)
parafascicular nucleus (pair)
8630 tax
nucleus subparafascicularis (par)
subparafascicular nucleus (pair)
8631 tax
nuclei intralaminares posteriores (par)
posterior intralaminar nuclei (pair)
62220 5846 tax
nucleus limitans (par)
limitans nucleus (pair)
62222 5848 tax
nucleus suprageniculatus (par)
suprageniculate nucleus (pair)
5850 tax
nuclei laterales thalami (par)
lateral nuclei of thalamus (pair) ; ventral region of thalamus (pair)
62184 5863 tax
nucleus ventralis anterior (par)
ventral anterior nucleus (pair)
62192 5864 tax
pars magnocellularis (par)
magnocellular division (pair)
62191 5865 tax
pars principalis (par)
principal division (pair)
5860 tax
nuclei ventrales laterales (par)
lateral ventral nuclei (pair)
5861 tax
nucleus ventrolateralis anterior (par)
anterior ventrolateral nucleus (pair)
5862 tax
nucleus ventrolateralis posterior (par)
posterior ventrolateral nucleus (pair)
5855 tax
nuclei ventrales mediales (par)
medial ventral nuclei (pair)
5856 tax
nucleus ventromedialis basalis (par)
basal ventromedial nucleus (pair)
5857 tax
nucleus ventromedialis principalis (par)
principal ventromedial nucleus (pair)
5858 tax
nucleus submedialis (par)
submedial nucleus (pair)
8632 tax
nucleus ventromedialis posterior (par)
posterior ventromedial nucleus (pair)
5851 tax
nuclei ventrobasales (par)
ventrobasal nuclei (pair)
84350 5852 tax
nucleus ventralis posterolateralis (par)
ventral posterolateral nucleus (pair)
62205 9026 tax
pars anterior (par)
anterior part (pair)
62206 9029 tax
pars posterior (par)
posterior part (pair)
62202 5853 tax
nucleus ventralis posteromedialis (par)
ventral posteromedial nucleus (pair)
62207 5854 tax
pars parvocellularis (par)
parvocellular part (pair)
62199 5859 tax
nucleus ventralis posteroinferior (par)
ventral posteroinferior nucleus (pair)
5838 tax
nuclei periventriculares thalami (par)
periventricular nuclei of thalamus (pair)
62151 5839 tax
nucleus parataenialis (par)
parataenial nucleus (pair)
62152 5840 tax
nucleus paraventricularis thalami (par)
paraventricular nucleus of thalamus (pair)
62153 5843 tax
nucleus medioventralis (par) ; nucleus reuniens (par)
medioventral nucleus (pair) ; reuniens nucleus (pair)
5845 tax
nuclei posteriores thalami (par) ; regio posterior thalami (par)
posterior nuclei of thalamus (pair) ; posterior region of thalamus (pair)
62177 5820 tax
nucleus lateralis posterior (par)
lateral posterior nucleus (pair)
5821 tax
nuclei pulvinares (par)
pulvinar nuclei (pair)
62180 5822 tax
nucleus pulvinaris anterior (par)
anterior pulvinar nucleus (pair)
62183 5823 tax
nucleus pulvinaris inferior (par)
inferior pulvinar nucleus (pair)
62181 5824 tax
nucleus pulvinaris lateralis (par)
lateral pulvinar nucleus (pair)
62182 5825 tax
nucleus pulvinaris medialis (par)
medial pulvinar nucleus (pair)
322077 7521 tax
corpora geniculata (par) ; nuclei geniculati (par) ; regio geniculata (par)
geniculate bodies (pair) ; geniculate nuclei (pair) ; geniculate region (pair)
62209 5777 tax
corpus geniculatum laterale (par)
lateral geniculate body (pair)
62214 5900 tax
nucleus dorsalis corporis geniculati lateralis (par)
dorsal lateral geniculate nucleus (pair)
76988 5901 tax
strata koniocellularia (par)
koniocellular layers (pair)
76989 5902 tax
strata magnocellularia (par)
magnocellular layers (pair)
76992 5903 tax
strata parvocellularia (par)
parvocellular layers (pair)
62211 5778 tax
corpus geniculatum mediale (par)
medial geniculate body (pair)
5906 tax
nuclei corporis geniculati medialis (par)
nuclei of medial geniculate body (pair)
62217 5907 tax
nucleus ventralis (par)
ventral principal nucleus (pair)
62216 5908 tax
nucleus dorsalis (par)
dorsal nucleus (pair)
62218 5909 tax
nucleus magnocellularis medialis (par)
medial magnocellular nucleus (pair)
83932 5870 tax
white matter of thalamus (pair)
14261 tax
radices centrales originis diencephali (par)
central roots of origin in diencephalon (pair)
62046 5782 tax
tractus opticus
optic tract
8505 tax
tractus proprii diencephali (par) ; tractus intrinsici diencephali (par)
proper tracts of diencephalon (pair) ; intrinsic tracts of diencephalon (pair)
62078 5871 tax
lamina medullaris lateralis
external medullary lamina
62079 5872 tax
lamina medullaris medialis
internal medullary lamina
5880 tax
fibrae intrathalamicae (par)
intrathalamic fibres (pair)
5885 tax
fibrae periventriculares thalami (par)
periventricular fibres of thalamus (pair)
8307 tax
tractus longi thalami (par)
long tracts of thalamus (pair)
8311 tax
tractus ascendentes medullae spinalis (par)
spinal ascending tracts (pair)
77766 12531 tax
tractus anterolateralis ; systema anterolaterale ; lemniscus spinalis
anterolateral tract ; anterolateral system ; spinal lemniscus
5325 tax
fibrae spinothalamicae (par)
spinothalamic fibres (pair)
7958 tax
tractus cervicothalamicus
cervicothalamic tract
8633 tax
tractus ascendentes trunci encephali (par)
ascending brain stem tracts
83675 12527 tax
lemniscus medialis
medial lemniscus
83852 8426 tax
tractus trigeminothalamici (par)
trigeminothalamic tracts (pair)
12170 tax
tractus trigeminothalamicus lateralis
lateral trigeminothalamic tract
72506 5462 tax
tractus trigeminothalamicus anterior ; tractus trigeminothalamicus ventralis ; lemniscus trigeminalis
anterior trigeminothalamic tract ; ventral trigeminothalamic tract ; trigeminal lemniscus
72500 5463 tax
tractus trigeminothalamicus posterior ; tractus trigeminothalamicus dorsalis
posterior trigeminothalamic tract ; dorsal trigeminothalamic tract
8430 tax
tractus vestibulothalamicus
vestibulothalamic tract
71114 5583 tax
brachium colliculi inferioris
brachium of inferior colliculus
72417 5584 tax
brachium colliculi superioris
brachium of superior colliculus
8634 tax
tractus efferentes telencephali (par)
telencephalic efferent tracts (pair)
327039 8525 tax
fibrae corticothalamicae (par)
corticothalamic fibres (pair)
62070 5874 tax
ansa lenticularis
ansa lenticularis
61976 5875 tax
fasciculus lenticularis
lenticular fasciculus
62065 5890 tax
fasciculus thalamicus
thalamic fasciculus
62059 8654 tax
fasciculus mammillothalamicus
mammillothalamic fasciculus ; mamillothalamic tract ▲
8635 tax
tractus efferentes thalami (par) ; radiationes thalamicae (par)
efferent tracts of thalamus (pair) ; thalamic radiations (pair)
76976 5877 tax
radiatio thalamica anterior ; radiatio anterior thalami
thalamic anterior radiation
8498 tax
fibrae thalamofrontales (par)
thalamofrontal fibres (pair)
76978 5878 tax
radiatio thalamica centralis ; radiatio centralis thalami
thalamic central radiation
7574 tax
fibrae thalamoparietales (par)
thalamoparietal fibres (pair)
76980 5879 tax
radiatio thalamica inferior ; radiatio inferior thalami
thalamic inferior radiation
5876 tax
fibrae thalamotemporales (par)
thalamotemporal fibres (pair)
62071 7618 tax
ansa peduncularis
ansa peduncularis
62413 8500 tax
radiatio acustica
acoustic radiation
76982 5886 tax
radiatio thalamica posterior ; radiatio posterior thalami
thalamic posterior radiation
61941 5884 tax
radiatio optica
optic radiation
7923 tax
fasciculus anterior
anterior bundle
7924 tax
fasciculus centralis
central bundle
7925 tax
fasciculus dorsalis
dorsal bundle
9184 tax
grey matter of epithalamus
62372 5803 tax
nucleus habenularis lateralis (par)
lateral habenular nucleus (pair)
62373 5804 tax
nucleus habenularis medialis (par)
medial habenular nucleus (pair)
6321 tax
cellulae cholinergicae epithalami ; cellulae cholinergicae Ch7
cholinergic cells of epithalamus ; cholinergic cells Ch7
77868 8640 tax
grey matter of pretectum
62402 5805 tax
area pretectalis (par)
pretectal area (pair)
272352 5806 tax
nuclei pretectales (par)
pretectal nuclei (pair)
5807 tax
nucleus pretectalis anterior (par)
anterior pretectal nucleus (pair)
72403 5808 tax
nucleus tractus optici (par)
nucleus of optic tract (pair)
72405 5809 tax
nucleus pretectalis olivaris (par)
olivary pretectal nucleus (pair)
84355 5810 tax
nucleus pretectalis posterior (par)
posterior pretectal nucleus (pair)
68463 8641 tax
nucleus commissurae posterioris (par)
nucleus of posterior commissure (pair)
8642 tax
pars principalis (par)
principal part (pair)
8643 tax
pars magnocellularis (par)
magnocellular part (pair)
256154 5638 tax
nuclei accessorii tractus optici (par)
accessory nuclei of optic tract (pair)
77651 5639 tax
nucleus accessorius posterior tractus optici (par) ; nucleus accessorius dorsalis tractus optici (par)
posterior accessory nucleus of optic tract (pair) ; dorsal accessory nucleus of optic tract (pair)
77652 5640 tax
nucleus accessorius lateralis tractus optici (par)
lateral accessory nucleus of optic tract (pair)
77653 5641 tax
nucleus accessorius medialis tractus optici (par)
medial accessory nucleus of optic tract (pair)
8644 tax
white matter of pretectum
8645 tax
tractus commissurales pretecti (par)
commissural tracts of pretectum (pair)
62072 5794 tax
commissura posterior
posterior commissure
8647 tax
tractus longi pretecti (par)
long tracts of pretectum (pair)
8648 tax
tractus descendentes pretecti (par)
descending tracts of pretectum (pair)
8490 tax
tractus tegmentalis medialis
tegmental medial tract
75216 8491 tax
tractus pretectoolivaris
pretectoolivary tract
8622 tax
tegmentum prerubrale ; tegmentum diencephali
prerubral tegmentum ; diencephalic tegmentum
8650 tax
grey matter of prerubral tegmentum
8144 tax
nucleus interstitialis (par)
interstitial nucleus (pair)
8147 tax
nucleus interstitialis rostralis fasciculi longitudinalis medialis (par)
rostral interstitial nucleus of medial longitudinal fasciculus (pair)
8150 tax
nucleus ellipticus (par)
elliptic nucleus (pair)
62035 5893 tax
nucleus subthalamicus (par)
subthalamic nucleus (pair)
8651 tax
white matter of prerubral tegmentum ; white substance of prerubral tegmentum
8652 tax
tractus longi tegmenti prerubralis
long tracts of prerubral tegmentum
8653 tax
tractus efferentes prerubrales
prerubral efferent tracts
8490 tax
tractus tegmentalis medialis
tegmental medial tract
75219 8492 tax
tractus prerubroolivaris
prerubroolivary tract
83846 8495 tax
fasciculus longitudinalis medialis descendens
descending medial longitudinal fasciculus
77031 8494 tax
tractus interstitiospinalis
interstitiospinal tract
180 lines
71.7 %
58.3 %
Scientific notes
UID
Libelle of note
5263
The Diencephalon in its classic, columnar view was divided into four dorsoventrally arranged columns separated by ventricular sulci: the Epithalamus, the Dorsal thalamus, the Ventral thalamus and the Hypothalamus. Extensive embryological studies made it clear that the thalamic 'columns' are derived from transversely oriented zones, the Prosomeres (see TE). Currently, the (Caudal) Diencephalon is subdivided into three segmental units, which from caudal to rostral, contain in their alar domains the Pretectum (prosomere 1 or P1), the Epithalamus and the Thalamus (P2) and the Ventral thalamus or Prethalamus (P3). The diencephalic basal plate contains the rostral part of the Substantia nigra-VTA complex and some other nuclei, collectively forming the Diencephalic or Prerubral tegmentum between the Mesencephalon and the Hypothalamus. The entire Hypothalamus or Rostral diencephalon arises from the alar and basal components of the secondary prosencephalon. The Preoptic area is one of the subpallial developmental domains (Puelles L, Harrison M, Paxinos G, Watson C 2013 A developmental ontology for the mammalian brain based on the prosomeric model. Trends Neurosci 36:570-578).
5813
For the Thalamic nuclei, a new subdivision based on Hirai T, Jones EG (1989 A new parcellation of the human thalamus on the basis of histochemical staining. Brain Res Rev 14:1-34) and updated by Morel A, Magnin M, Jeanmonod D (1997 Multiarchitectonic and stereotactic atlas of the human thalamus. J Comp Neurol 387:618-677) is used to replace the list of terms in TA (14.1.08.603-14.1.08.658), largely a matter of a more practical grouping of nuclei. As Latin synonym the term Regio is adopted from Percheron G (2004 Thalamus. In: Paxinos G, Mai JK, eds: The Human Nervous System, 2nd ed. Elsevier, Amsterdam, pp 592-675).
8147
New term, described by Horn, AKE, Büttner-Ennever, JA (1998 Premotor neurons for vertical eye-movements in the rostral mesencephalon of monkey and man: The histological identification by parvalbumin immunostaining. J Comp Neurol 392:413-427) as a premotor nucleus for vertical eye movements.
8150
See note # 8641
8426
(Tractus trigeminothalamici): The Tractus trigeminothalamicus anterior arises in the Spinal trigeminal nucleus and joins the Medial lemniscus, whereas the Tractus trigeminothalamicus lateralis arises in the Caudal part of the Spinal trigeminal nucleus and joins the Anterolateral tract.
8430
(Tractus vestibulothalamicus): In monkeys, Vestibulothalamic projections pass via both the FLM and the Ascending tract of Deiters (Lang W, Büttner-Ennever JA, Büttner U 1979 Vestibular projections to the monkey thalamus: An autoradiographic study. Brain Res 177:3-17). Zwergal et al. (2008) demonstrated a Vestibulothalamic tract adjacent to the Medial lemniscus in humans (Zwergal A, Büttner-Ennever JA, Brandt T, Strupp M 2008 An ipsilateral vestibulothalamic tract adjacent to the medial lemniscus in humans. Brain 131:2928-2935).
8622
The basal parts of the prosomeres P1-P3 form several nuclei, previously included in the Mesencephalon (see General footnote). The rostral parts of the Substantia nigra/VTA-complex also derive from P1-P3. The term Tegmentum prerubrale is preferred as topographic term over Tegmentum diencephali.
8632
The Nucleus ventromedialis posterior (Ventromedial posterior nucleus; VMpo) is a newly discovered nucleus involved in pain perception as part of the Ventromedial nucleus (Blomqvist A, Zhang ET, Craig AD 2000 Cytoarchitectonic and immunohistochemical characterization of a specific pain and tempearature relay, the posterior portion of the ventral medial nucleus, in the human thalamus. Brain 123:601-619).
8641
Replaced from Mesencephalon; for the subdivision of this nucleus, Principal and Magnocellular parts are adopted, following Olszewski and Baxter3. The Ventral division is renamed as Nucleus ellipticus (coming from Cetacea and Proboscidea) or Nucleus of Darkschewitsch, not part of the Nucleus of the posterior commissure.
Signature
Type of list P3F
List Unit Identifier 5263
Sublist 1 5813 substantia grisea thalami 194/65 on 30.12.2021
Sublist 2 5870 substantia alba thalami 53/42 on 1.4.2025
Sublist 3 7511 morphologia externa diencephali 35/18 on 30.12.2021
Sublist 4 8640 substantia grisea pretecti 39/14 on 16.4.2018
Sublist 5 8644 substantia alba pretecti 12/7 on 25.3.2019
Sublist 6 8650 substantia grisea tegmenti prerubralis 12/5 on 1.4.2025
Sublist 7 8651 substantia alba tegmenti prerubralis 6/7 on 1.4.2025
Sublist 8 9033 substantia grisea prethalami 24/9 on 3.6.2018
Sublist 9 9104 substantia alba epithalami 5/6 on 16.4.2018
Sublist 10 9184 substantia grisea epithalami 7/4 on 16.4.2018
Subtotals subchildren 387 subunits 177
Proper children 12
Number of children 399 (validated)
Proper units 3
Number of units 180 (validated)
Signature 2905 (validated since 30.12.2021)
Date: 13.04.2025